I want to submit a manuscript with a journal recommending the APA style guide for formatting.
When looking at my boxplots, a colleague of mine wondered why the whiskers do not represent the 95% confidence interval. It is the default setting for matplotlib and I did not question that so far.
According to the very good Wikipedia article on boxplots there are different possibilities for whiskers representation:
- the minimum and maximum of all of the data
- the lowest datum still within 1.5 IQR of the lower quartile, and the highest datum still within 1.5 IQR of the upper quartile (often called the Tukey boxplot)
- one standard deviation above and below the mean of the data
- the 9th percentile and the 91st percentile
- the 2nd percentile and the 98th percentile
Does anybody know what is the most common whisker boundary and if there is a recommendation in the APA style?
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