vendredi 20 mars 2015

Boxplot whiskers for a joural publication using APA style guide


I want to submit a manuscript with a journal recommending the APA style guide for formatting.


When looking at my boxplots, a colleague of mine wondered why the whiskers do not represent the 95% confidence interval. It is the default setting for matplotlib and I did not question that so far.


According to the very good Wikipedia article on boxplots there are different possibilities for whiskers representation:



  • the minimum and maximum of all of the data

  • the lowest datum still within 1.5 IQR of the lower quartile, and the highest datum still within 1.5 IQR of the upper quartile (often called the Tukey boxplot)

  • one standard deviation above and below the mean of the data

  • the 9th percentile and the 91st percentile

  • the 2nd percentile and the 98th percentile


Does anybody know what is the most common whisker boundary and if there is a recommendation in the APA style?





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